Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLQNNKGKFNKEQFCQLEDEQVIEKVHVGDSDALDYLITKYRNFVRAKARSYFLIGADREDIVQEGMIGLYKSIRDFKEDKLTSFKAFAELCITRQIITAIKTATRQKHIPLNS-YASLDKPIFDEESDRTLLDVISGAKTLNPEEMIINQEEFDDIEMKMGELLSDLERKVLVLYLDGRSYQEISDELNRHVKSIDNALQRVKRKLEKYLEIREISL
1OR7 Chain:A ((4-182))
----------------QLTDQVLVERVQKGDQKAFNLLVVRYQHKV-ASLVSRYVPSGDVPDVVQEAFIKAYRALDSFRGDS-----AFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIEAENF--ESGGA--------------NLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREAID----------
General information:
TITO was launched using:
RESULT:
Template:
1OR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39544 for 1058 contacts (-37.4/contact) +
2D Compatibility (PS) -18028 + (NN) -6371 + (LL) 3260
1D Compatibility (HY) -10800 + (ID) 2250
Total energy: -73733.0 ( -69.69 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_1OR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OR7-query.scw
PDB file :
Tito_Scwrl_1OR7.pdb
: