Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKKITLACKTCGNRNYTTMKSSASAAERLEVKKYCSTCNSHTAHLETK
3J5S Chain:H ((4-52))IREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAK


General information:
TITO was launched using:
RESULT:

Template: 3J5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -670 for 278 contacts (-2.4/contact) +
2D Compatibility (PS) -5121 + (NN) -91 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -7882.0 ( -28.35 by residue)
QMean score : 0.203

(partial model without unconserved sides chains):
PDB file : Tito_3J5S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J5S-query.scw
PDB file : Tito_Scwrl_3J5S.pdb: