Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEHYYSEKPSVKSNKQTWSFRLRNKDFTFTSDSGVFSKKEVDFGSRLLIDSFEEPEVEGGILDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELSNENAEQNGITN--VKIYQSDLFSNVDSAQTFASILTNPPIRAGKKVVHAIFEKSAEHLKASGELWIVIQKKQGAPSAIEKLEELFDEVSVVQKKKGYYIIKAKKV |
1DUS Chain:A ((4-197)) | -----FSEKPTTKSDVKIVEDILRGKKLKFKTDSGVFSYGKVDKGTKILVENVVVDK-DDDILDLGCGYGVIGIALADEVKSTT--MADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKD-RKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIKGGYRVLKSKKL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DUS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 13755 for 1538 contacts (8.9/contact) +
2D Compatibility (PS) -19789 + (NN) 134 + (LL) 1004
1D Compatibility (HY) -2000 + (ID) 2250
Total energy: -9146.0 ( -5.95 by residue)
QMean score : 0.263
|
|
|