Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTINQLIRKGRVSKVENSKSPALNKGYNSFKKEHTNVSSPQKRGVCTRVGTMTPKKPNSALRKYARVRLTNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGVENRAQGRSKYGTKKPKAK
4OX9 Chain:L ((2-123))
-PTINQLVRKGREKVRKKSKVPALK-------------GAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPK--
General information:
TITO was launched using:
RESULT:
Template:
4OX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22282 for 796 contacts (-28.0/contact) +
2D Compatibility (PS) -13267 + (NN) -6947 + (LL) 864
1D Compatibility (HY) -10800 + (ID) 4650
Total energy: -57082.0 ( -71.71 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_4OX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OX9-query.scw
PDB file :
Tito_Scwrl_4OX9.pdb
: