Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGVEMDAYEVGQEVKVEIFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVDPNRVFKGKLLPGRMGGEQITVQNLEIVKVDAERNLLLIKGNVPGAKKSLITVKSAVKSK
3J3V Chain:D ((3-208))--KGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGVEMDAYEVGQEVKVEIFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGPVDPNRVFKGKLLPGRMGGEQITVQNLEIVKVDAERNLLLIKGNVPGAKKSLITVKSAVKS-


General information:
TITO was launched using:
RESULT:

Template: 3J3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9970 for 1406 contacts (-7.1/contact) +
2D Compatibility (PS) -21448 + (NN) -961 + (LL) 324
1D Compatibility (HY) -24400 + (ID) 10300
Total energy: -66755.0 ( -47.48 by residue)
QMean score : 0.276

(partial model without unconserved sides chains):
PDB file : Tito_3J3V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J3V-query.scw
PDB file : Tito_Scwrl_3J3V.pdb: