Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKLEITLKRSVIGRPEDQRVTVRTLGLKKTNQTVVHEDNAAIRGMINKVSHLVSVKEQ
3J3V Chain:Y ((3-58))
--KLEITLKRSVIGRPEDQRVTVRTLGLKKTNQTVVHEDNAAIRGMINKVSHLVSVKE-
General information:
TITO was launched using:
RESULT:
Template:
3J3V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17830 for 321 contacts (-55.5/contact) +
2D Compatibility (PS) -5818 + (NN) 243 + (LL) 472
1D Compatibility (HY) -7200 + (ID) 2800
Total energy: -32933.0 ( -102.60 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_3J3V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J3V-query.scw
PDB file :
Tito_Scwrl_3J3V.pdb
: