Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
1P3J Chain:A ((1-212))
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLL-----
General information:
TITO was launched using:
RESULT:
Template:
1P3J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85533 for 1693 contacts (-50.5/contact) +
2D Compatibility (PS) -23618 + (NN) -18314 + (LL) -40
1D Compatibility (HY) -29600 + (ID) 10600
Total energy: -167705.0 ( -99.06 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_1P3J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P3J-query.scw
PDB file :
Tito_Scwrl_1P3J.pdb
: