Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIICKTPRELGIMREAGRIVALTHEELKKHIKPGISTKELDQIAERFIKKQGAIPSFKGYNGFRGSICVSVNEELVHGIP-GSRVLKDGDIISIDIGAKLNGYHGDSAWTYPVGNISDDDKKLLEVTEESLYKGLQEAKPGERLSNISHAIQTYVENEQFSVVREYVGHGVGQDLHEDPQIPHYGPPNKGPRLKPGMVLAIEPMVNAGSRYVKTLADNWTVVTVDGKKCAHFEHTIAITETGFDILTRV
1O0X Chain:A ((6-253))
MIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHGLPLKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGFNVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILITENGAEILTK-
General information:
TITO was launched using:
RESULT:
Template:
1O0X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101355 for 2258 contacts (-44.9/contact) +
2D Compatibility (PS) -27029 + (NN) -13621 + (LL) 192
1D Compatibility (HY) -21200 + (ID) 6350
Total energy: -169363.0 ( -75.01 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_1O0X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O0X-query.scw
PDB file :
Tito_Scwrl_1O0X.pdb
: