Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGQKAWVNIGKTEFILLLVVGILTIINVLTADGEKRTFHSPKKKNINHLTLYDCVSPEVQNSINETGRVTNFF
2JOY Chain:A ((5-62))
EVGRICVKVKGREAGSKCVIVDIIDDNFVLVTGPKDITGVKRRRVNILHLEPTDKKID----------------
General information:
TITO was launched using:
RESULT:
Template:
2JOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17789 for 319 contacts (-55.8/contact) +
2D Compatibility (PS) -5953 + (NN) 1511 + (LL) 944
1D Compatibility (HY) 400 + (ID) 600
Total energy: -21487.0 ( -67.36 by residue)
QMean score : 0.230
(partial model without unconserved sides chains):
PDB file :
Tito_2JOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JOY-query.scw
PDB file :
Tito_Scwrl_2JOY.pdb
: