Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSANLTDFVTKTIEEMNSFDRENMECIKKLIRKAIDFYHLKSYEEVEETHSGNVRFLHVHSMMEENMLS---KMIVVTRNGKTDLDIEGVYEGYVVREY
3IZY Chain:P ((304-363))
---------------------------------------LLAYDVVCEDYGGDVQAVHVSALTGENMMALAEATIALAEMLELKADPTGAVEGTVIESF
General information:
TITO was launched using:
RESULT:
Template:
3IZY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3706 for 228 contacts (16.3/contact) +
2D Compatibility (PS) -6001 + (NN) -2329 + (LL) 3364
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -4910.0 ( -21.54 by residue)
QMean score : 0.041
(partial model without unconserved sides chains):
PDB file :
Tito_3IZY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IZY-query.scw
PDB file :
Tito_Scwrl_3IZY.pdb
: