Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIQRETSGHIAAIVTILIWGTTFISTKVLLADFSPMEILFYRFLMGFIALILVRPNMIPFRNWRQELLFAGAGLFGVTLYFLLENIALTYTYASNVGMIVSIIPMITAVLAHFLLEGEKLRLTFLIGFISALIGLLLITFNGNVVLRLNPLGDIMAAGAALVFGGYSIFMKKLSAYEYHIIELTQRVFLYGLLFMVPALFLFDFHFDLSRFSSASNILNMLFLGIGASALCFATWNYSVGVLGAVKSSAYIYMVPVITIAASVLILHENMTWIALLGGALTLLGLYISELKPKAKLLENGCKMDA
3EXW Chain:A ((221-308))--------------------------------------------------------------------------------------------------------------------------------------------------------GQNMATGALTNAKG---FMPSTTAYPFNVNSREKENYIYGTCYYTASDHTA-FPIDISV------MLNQRALNNETSYCIRVTWSWNTGVAPEVQTSA--------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3EXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 214 -37584 -175.62 -427.09
target 2D structure prediction score : 0.23
Monomeric hydrophicity matching model chain A : 0.45

3D Compatibility (PKB) : -175.62
2D Compatibility (Sec. Struct. Predict.) : 0.23
1D Compatibility (Hydrophobicity) : 0.45
QMean score : -0.115

(partial model without unconserved sides chains):
PDB file : Tito_3EXW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EXW-query.scw
PDB file : Tito_Scwrl_3EXW.pdb: