Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNYIPCMITIGNFICGLLAIHSLLYHNIHSAVLFIFTGMFLDFFDGMAARKLNAVSDMGR------ELDSF-ADLVTF-GVAPSMLAYSVALYTLPFIGILCALT-YSICGMLRLSKFNIEQSKLPTFIGMPIPFAGMCLVILSFTYNPILLAIGTCGLSYLMVSKIKFPHFKKHAAENLESGRWN
4H7N Chain:A ((75-170))------------------------------------------------------VNDTGRLSITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDT---IPALLAGCAVVVKPSEIAPRFVA---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4H7N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 262 -28133 -107.38 -323.37
target 2D structure prediction score : 0.15
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -107.38
2D Compatibility (Sec. Struct. Predict.) : 0.15
1D Compatibility (Hydrophobicity) : 0.57
QMean score : -0.207

(partial model without unconserved sides chains):
PDB file : Tito_4H7N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4H7N-query.scw
PDB file : Tito_Scwrl_4H7N.pdb: