Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMEMFDLEFMRRAFLAGGMIAVMAPILGVYLVLRRQALMADTLSHISLSGVAIGFFLSTNITAASIVVVTIGAIGIEYMRRAYRTYSEVSIAILMAAGLSFAMFLISLSKGTANMSIDQYLFGSLVTVNQQQVYIISIITLLILLYFIVLRRPLYLLTFDEATAKTSGINTNVLSLSFSIVTGLAISVIIPIIGVLLVSALLVLPAAFAIRIAKGFNMVFITAILISLFSVFT--GLTSSYQLGTPPGPSITLLLIVLLLIGFAVQGVWTFIKKEAQRKKRSR
5AVM Chain:A ((182-260))--------------------------------------------------------------------------------------------------------------------------------------------------------------------SSGPHTNGYSLIRKVVAGQDLSAPVPELGESLKEALLRPHRAY----LKEFRLLWEAGVELHAAAHITGGGLPENLPRALPPG-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5AVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 159 -24280 -152.70 -315.32
target 2D structure prediction score : 0.29
Monomeric hydrophicity matching model chain A : 0.46

3D Compatibility (PKB) : -152.70
2D Compatibility (Sec. Struct. Predict.) : 0.29
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.045

(partial model without unconserved sides chains):
PDB file : Tito_5AVM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AVM-query.scw
PDB file : Tito_Scwrl_5AVM.pdb: