Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIAGYIMAAENQTLNQWTINQLGITRGDSILEVGFGPGYCMQQMLKREKDVHLHGIDVSEAMLKLAARRVKPKG----VRLIQGSIETFPLPASFYDKVISVNNYTIWNDQTKGIKQIYRALKPGGKAAITMQPREADASPEKTKSFGRQMIADFKAAGFEDIDIQFKNIKPELSVCATAKKPAT
3DLC Chain:A ((29-146))----YPIIAEN------IINRFGITAG-TCIDIGSGPG-ALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYI-------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 577 -73486 -127.36 -644.61
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -127.36
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.685

(partial model without unconserved sides chains):
PDB file : Tito_3DLC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DLC-query.scw
PDB file : Tito_Scwrl_3DLC.pdb: