Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVFLIGANGQIGQRLVSLFQDNPDHSIRAMVRKEEQKASLEAAGA-EAVLANLEGSPEEIAAAAKGCDAIIFTAGSGGSTGYDKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNRENWNEALKPYYVAKHYADKILEASGLTYTIIRPGGLRNEPGTGTVSAA---KDLERGFISRDDVAKTVIASLDEKNTENRAFDLTEGDTPIAEALKKL
3E8X Chain:A ((23-234))-RVLVVGANGKVARYLLSELK-NKGHEPVAMVRNEEQGPELRERGASDIVVANLE---EDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRS-ITRHDVAKVIAELVDQQHTIGKTFEVLNGDTPIAKVVEQL


General information:
TITO was launched using:
RESULT:

Template: 3E8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1134 -125799 -110.93 -604.80
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : -110.93
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_3E8X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E8X-query.scw
PDB file : Tito_Scwrl_3E8X.pdb: