Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKTFVKKAMLTTAAMTSAALLTFGPDAASAKTPVDNTAVQLQHQASTNEDLNTFI-DILNQCIYEQDGVYYFDSEKAVELGMTKEEAQVIATLWESTSEFFSIVSQCVYLEDGNYKFDTEKAVELGFTEKEALALEQFFSAVSLKIHILQAAIVLQDDVYSYDKDAALQAGATPLQADVYEKLFSALSQEQLAAIYDMIHPQA
3JB6 Chain:A ((558-608))----------------------------------------------NTKDIYNTFVLDVASKCTVPRFGPYYAKNMEVFEAGNRQSQVRYVNAAWQA-----------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3JB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 108 -5298 -49.06 -105.96
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -49.06
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.132

(partial model without unconserved sides chains):
PDB file : Tito_3JB6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JB6-query.scw
PDB file : Tito_Scwrl_3JB6.pdb: