Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKS---------QMGVDIEQNFEPKYITIRGKGPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDLDLNSDCRVVFNEITKDAIKESFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVALRLIIDREKEINDFKPEEYWTIDG-TFLKGQETFEASFFGKNGKKL-PLNSEADVKEILSQLKGNQYTVEKVTKKERKRNPALPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGIDLGREGTVGLITYMRTDSTRISNTAVDEAAAFIDQTYGKEFLGGKRKPAKKNENAQDAHEAIRPTSVLRKPSELKAVLGRDQMRLYKLIWERFVASQMAPAVLDTMSVDLTNNGLTFRANGSKVKFSGFMKVYVEGKDDQMEEKDRMLPDLQEGDTVLSKDIEPEQHFTQPPPRYTEARLVKTLEERGIGRPSTYAPTLDTIQRRGYVALDNKRFVPTELGQIVLDLIMEFFPEIINVEFTAKMERDLDHVEEGNTEWVKIIDNFYTDFEKRVKKAESEMKEVEIEPE---YAGEDCELCSSPMVYKMGRYGKFLACSNFP-----DCRNTKPIVKQIGV------------------KCPSCGEGNIVERKSKKKRVFYGCDRYPDCE----------FVSWDKPIERKCPKCGKMLVEKKLKKGIQVQCV--ECDYKEEPQK
4RUL Chain:A ((7-752))----LVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPT-KDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNIDRVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEVDASTTTPSGEALALQVTHQNDKPFRPVNKE-QTQAAVSLLEKARYSVLEREDKPTTSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEA---------GYITYMRTDSTNLSQDAVNMVRGYISDNFGKKYLPESPNQYASK---QEAHEAIRPSDVNVMAESLKDMEA-DAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKG---DEDRILPAVNKGDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDHFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGEDAETNALRAKRRCPKCGTA-MDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIV-ECEKCGSEMHLKMGRFGKYMACTNEEC--------


General information:
TITO was launched using:
RESULT:

Template: 4RUL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3240 -224058 -69.15 -340.00
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -69.15
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.479

(partial model without unconserved sides chains):
PDB file : Tito_4RUL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RUL-query.scw
PDB file : Tito_Scwrl_4RUL.pdb: