Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKCNLPEVVVTGVGVTASIGQGKEDFASSLLSGRHAFDVMKRSGRQKDSRFIGAEIASLSYPDRLSKKMLRKASFSSRAALVTLTEAWEEAELDDAD--SSRIGLVVGGSNFQQREN----FEVYERYQDRSGFISPAYGLSFMDSDLC-GICTDQFGITGLAYTVGGASASGQLAVIHAIQQVLSGEVDTCIALGALMDLSYMECEALRALGAMGTDKYADEPENACRPFDQNRDGFIYGESCGALVIERKETALRRGLKPYAALSGWSIKLDGNRNPDPSLEGE--IHVIQKALERARLLPEDIDYINPHGTGSFIGDEIELKALRACRLSHAY---INATKSITGHGLSAAGIVEIISVLLQMKKSALHPSRNLDHPIDD-SFHWVNEKSISYRIKNALSLSMGFGGMNTAVCIQNIEKCGGES
4LS6 Chain:A ((19-425))--------VVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKVAAELKDFNVEDYMDKKEARKMDRFTQYAVVAAKMAVEDADLNITDEIAPRVGVWVG-SGFGGLETLESQFEIFLTKGPRR--VSPFF-VPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKVIQRGDADVMVTGGTEAPLTRMSFAGFSANKALSTNP---DPKTASRPFDKNRDGFVMGEGAGIIVLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEAIKDAGIAPEEIDYINAHGTSTYYNDKYETMAIKTVFGEHAHKLAVSSTKSMTGHLLGAAGGIEAIFSILAIKEGVIPPTINIQTPDEECDLDYVPDEARRQELNYVLSNSLGFGGHNATLIFKKYQ------


General information:
TITO was launched using:
RESULT:

Template: 4LS6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2783 -203998 -73.30 -517.76
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -73.30
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_4LS6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LS6-query.scw
PDB file : Tito_Scwrl_4LS6.pdb: