Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTLWVGILVGVVALLIGVALGFFIARKYMMSYLKKNPPINEQMLRMMMMQMGMKPSQKKINQMMKAMNNQTK
5GAR Chain:N ((357-389))--FWFGMIVGD----IGYALLFYLVGRWLSGYVKRNEPL---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5GAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain N - contact count / total energy / energy per contact / energy per residue : 25 -6574 -262.94 -199.20
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain N : 0.68

3D Compatibility (PKB) : -262.94
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.419

(partial model without unconserved sides chains):
PDB file : Tito_5GAR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAR-query.scw
PDB file : Tito_Scwrl_5GAR.pdb: