Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNELKDFFFLGKPIQTEIGEIDFIRLKDYPLYTKELSMLRMNKKSLIKEYSRFNEDGSLDPF-IIEMKKRDLYEIVHSVLPDFHEAYFKVFSKVLINKDSLSLIGKHNFPRLRKLILDMHCITEDKVVDNDELQEFHDISKSLKQQDSQSDLKDIVSCVAAFNGYTYEEISEMTMYQLYLSFYRMAEVMNYNTTTLFATVSPDVKVSDWSSHINLYKEESYHLSTKDAKNIEQLFGG
4PTF Chain:A ((954-1013))---------------------------DGPYKAMILPSSKEEGKGIKKRYAVFNEDGSLAELKGFELKRRGELQLIK----NFQSDIFKVF--------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4PTF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 154 6846 44.45 116.03
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 44.45
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.262

(partial model without unconserved sides chains):
PDB file : Tito_4PTF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PTF-query.scw
PDB file : Tito_Scwrl_4PTF.pdb: