Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGYLHDAFSLKGKTALVTGPGTGIGQGIAKALAGAGADIIGTSHTSSLSETQQLVEQEGRIFTSFTLDMSK----PEAIKDSAAELFENRQIDILVNNAGIIHREKAEDFPEENWQHVLNVNLNSLFILTQLAGRHMLKRGHG-KIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYISTANTKPIRDDEKRNEDILKRIPAGRWGQADDIGGTAVFLASRASDYVNGHILAVDGGWLSR
4Z9Y Chain:A ((4-253))-----NSFDLQGKVALITGCDTGLGQGMAIGLAQAGCDIVGVNIVEP-KDTIEKVTALGRRFLSLTADMSNVSGHAELVEKAVAEF---GHVDILVNNAGIIRREDAIEFSEKNWDDVMNLNIKSVFFMSQTVARQFIKQGKGGKIINIASMLSFQGGIRVPSYTASKSAVMGVTRLMANEWAKHGINVNAIAPGYMATNNTQQLRADEERSKEILDRIPAGRWGLPQDLMGPSVFLASSASDYINGYTIAVDGGWLAR


General information:
TITO was launched using:
RESULT:

Template: 4Z9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1336 -44749 -33.49 -182.65
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.87

3D Compatibility (PKB) : -33.49
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.674

(partial model without unconserved sides chains):
PDB file : Tito_4Z9Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Z9Y-query.scw
PDB file : Tito_Scwrl_4Z9Y.pdb: