Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKVTMLGAGSWGTALALVLTDNGNEVCVWAHRADLIHQINELHENKDYLPNVKLSTSIKGTTDMKEAVSDADVIIVAVPTKAIRE-VLRQAVPFITKKAVFVHVSKGIEPDSLLRISEIMEIELPSDVRKDIVVLSGPSHAEEVGLRHPTTVTASSKSMRAAEEVQDLFINHNFRVYTNPDIIGVEIGGALKNIIALAAGITDGLGYGDNAKAALITRGLAEIARLGTKMGGNPLTFSGLTGVGDLIVTCTSVHSRNWRAGNLLGKGYKLEDVLEEMGMVVEGVRTTKAAYQLSKKYDVKMPITEALHQVLFNGQKVETAVESLMARGKTHEMEDLVNTFENQVK
1Z82 Chain:A ((16-325))--RFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSH-TSPYVEESKIT--VRATNDLEE-IKKEDILVIAIPVQYIREHLLRLPV----KPSMVLNLSKGIEIKTGKRVSEIVEEILGCPY----AVLSGPSHAEEVAKKLPTAVTLAGEN---SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIARGFNPLKLLESSNQVVEGAFTVKAVMKIAKENKIDMPISEEVYRVVYEGKPPLQSMRDLMR-------------------


General information:
TITO was launched using:
RESULT:

Template: 1Z82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1857 -72247 -38.91 -233.81
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -38.91
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_1Z82.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Z82-query.scw
PDB file : Tito_Scwrl_1Z82.pdb: