Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMTSRKLSDILKQRLQHENR---SFLFDREKDTLRVEDQTTKKGITLDLPPIIAKWELKKDEAIDEIVYYVSEAMTAMEGKAQEMTGKETRIYPVIRSTSFPDKSSEDIPLIYDDHTAETRIYYALDLGKTYRLIDQRMLEKENWTKERIRETAAFNLRSLPTVVKEDTVAGNYFYFFRANDGYDASRILNEAILNEYKQHAEGELAISVPHQDVLILADIRNESGYDILGQMSMSFFAGGTVPITALSFLYNEGKLEPVFILAKSRPKKD
2GJH Chain:A ((14-42))--KEAEKFAAILIKVFAELGYNDINVTWDGD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 22 60 2.70 2.29
target 2D structure prediction score : 0.88
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : 2.70
2D Compatibility (Sec. Struct. Predict.) : 0.88
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.758

(partial model without unconserved sides chains):
PDB file : Tito_2GJH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GJH-query.scw
PDB file : Tito_Scwrl_2GJH.pdb: