Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKIVANTADLIGDTPLVRLNRLQPENAAQVYLKLEFFNPSGSVKDRAAYQMIIEAEQNGLLKPGSVIIEPTSGNTGIGLAMNAAARGYKAILVMPDTMTKERINLLKAYGAEVVLTPGEERMPGSIKKAKELAEQIPNSYIPM-QFDNTANPDAHRKTTAPEIARAIEEIGKPLGAFVASSGTGGTITGTGEALKEL--FPDITVHVVEPAGSPVLSGG------KPGAHKLVGTSPGFIPPILNEDVYDEIIKISDEDAYTTTRRLAAEEGILVGPSSGAACFAAIETAKRLS-PDKVVVCMTADTGERYLSTDLWSFI-
1OAS Chain:A ((1-315))-SKIYEDNSLTIGHTPLVRLNRI---GNGRILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDT---DGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLF


General information:
TITO was launched using:
RESULT:

Template: 1OAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1802 1704 0.95 5.60
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : 0.95
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_1OAS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OAS-query.scw
PDB file : Tito_Scwrl_1OAS.pdb: