Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVYAVNMGIVFIWSWFAKMCGGRDDSLATGYRPNKLLIWIPLASLVLVSGLRYRVGTDFQTYTLLYELAGDYQNVWQIFGFGTAKTATDPGFTALLWLMNFITEDPQIMYFTVAVVTYSFIMKTLADYGRPFELSVFLFLGTFHYYASFNGIRQYMVAAVLFWAIRYIISGNWKRYFLIVLVSSLFHSSALIMIPVYFIVRRKAWSPAIFGLSALFLGMTFLYQKFISVFVVVLENSSYSHYEKWLMTNTNGMNVIKIAVLVLPLFLAFCYKERLRSLWPQIDIVVNLCLLGFLFGLLATKDVIFARFNIYFGLYQMILVPYFVRIFDEKSNALIYIAIVVCYFLYSYLLMPVDSSVLPYRTIFSR
3M1F Chain:V ((10-17))-----------------------------------------------------------------------------------------------------------------------------------------------------MEQIRQGV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3M1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain V - contact count / total energy / energy per contact / energy per residue : 1 -83 -83.00 -10.38
target 2D structure prediction score : 0.00
Monomeric hydrophicity matching model chain V : 0.34

3D Compatibility (PKB) : -83.00
2D Compatibility (Sec. Struct. Predict.) : 0.00
1D Compatibility (Hydrophobicity) : 0.34
QMean score : 0.740

(partial model without unconserved sides chains):
PDB file : Tito_3M1F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M1F-query.scw
PDB file : Tito_Scwrl_3M1F.pdb: