Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGHYSHSDIEEAVKSAKKEGLKDYLYQEPHGKKRSHKKSHRTHKKSRSHKKSYCSHKKSRSHKKSFCSHKKSRSHKKSYCSHKKSRSHKKSYRSHKKSRSYKKSYRSYKKSRSYKKSCRSYKKSRSYKKSYCSHKKKSRSYKKSCRTHKKSYRSHKKYYKKPHHHCDDYKRHDDY------DSKKEYWKDGNCWVVKKKYK
1FN9 Chain:A ((62-98))----------------------------------------------------------------------------------------------------------------------------------------------------------QRKLKHLPHHRCNQQIRHQDYVDVQFADRVTAHWKRG----------


General information:
TITO was launched using:
RESULT:

Template: 1FN9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 8 425 53.06 13.69
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 53.06
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.560

(partial model without unconserved sides chains):
PDB file : Tito_1FN9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1FN9-query.scw
PDB file : Tito_Scwrl_1FN9.pdb: