Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKQVSHAIIISVMLSFVIAVFHTIHASELTPLAQMAEGMERQDVSIDKWTLHAKQNLSLTEKEFYQKVQRLKQEYRQYDWVIAREDKMIKAIGTYTDKKNRTSFRLQLVTTLKKHNPTSYLLYEQMSLETPDSWNDTYEQFERETLGIFQEKVVIFTCLNGHLDDNMNIVLQKKANQLLNEFQARSVEHVVEPNFVSISAFTDEWEEYIMTSKHKMNLQIALRSAGMGGKHTVTVGTPIVTTEY
2FPN Chain:A ((1-214))------------------------------LTPLAQMAEGMERQDVSIDKWTLHAKQNLSLTEKEFYQKVQRLKQEYRQYDWVIAREDKMIKAIGTYTDKKNRTSFRLQLVTTLKKHNPTSYLLYEQMSLETPDSWNDTYEQFERETLGIFQEKVVIFTCLNGHLDDNMNIVLQKKANQLLNEFQ---VEHVVEPNFVSISAFTDEWEEYIMTSKHKMNLQIALRS------HTVTVGTPIVTT--


General information:
TITO was launched using:
RESULT:

Template: 2FPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 798 -77568 -97.20 -378.38
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.91

3D Compatibility (PKB) : -97.20
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.554

(partial model without unconserved sides chains):
PDB file : Tito_2FPN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FPN-query.scw
PDB file : Tito_Scwrl_2FPN.pdb: