Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKRTAFVMGASQGIGKAIALKLADQHFSLVINSRNLDNIESVKEDILAKHPEASVIVLAGDMSDQHTRAGIFQKIESQCGRLDVLINNIPGGAPDTFDNCNIEDMTATFTQKTVAYIDAIKRASSLMKQNEFGRIINIVGNLWKEPGANMFTNSMMNAALINASKNISIQLAPHNITVNCLNPGFIATDRYHQFVENVMKKNSISKQKAEEQIASGIPMKRVGSAEETAALAAFLASEEASYITGQQISADGGSMKSI
3U49 Chain:A ((2-259))-SKRTAFVMGASQGIGKAIALKLADQHFSLVINSRNLDNIESVKEDILAKHPEASVIVLAGDMSDQHTRAGIFQKIESQCGRLDVLINNIPGGAPDTFDNCNIEDMTATFTQKTVAYIDAIKRASSLMKQNEFGRIINIVGNLWKEPGANMFTNSMMNAALINASKNISIQLAPHNITVNCLNPGFIATDRYHQFVENVMKKNSIS----------GIPMKRVGSAEETAALAAFLASEEASYITGQQISADGGSMKSI


General information:
TITO was launched using:
RESULT:

Template: 3U49.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1356 -115473 -85.16 -465.62
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.99

3D Compatibility (PKB) : -85.16
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.99
QMean score : 0.619

(partial model without unconserved sides chains):
PDB file : Tito_3U49.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3U49-query.scw
PDB file : Tito_Scwrl_3U49.pdb: