Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYVRHLGLRDFRSWACVDLELHPGRTVFVGPNGYGKTNLIEALWYSTTLGSHRVSADLPLIRVGTDRAVISTIVVNDGRECAVDLEIATGRVNKARLNRSSVRSTRDVVGVLRAVLFAPEDLGLVRGDPADRRRYLDDLAIVRRPAIAAVRAEYERVLRQRTALLKSVPGARYRGDRGVFDTLEVWDSRLAEHGAELVAARIDLVNQLAPEVKKAYQLLAPESRSASIGYRASMDVTGPSEQSDIDRQLLAARLLAALAARRDAELERGVCLVGPHRDDLILRLGDQPAKGFASHGEAWSLAVALRLAAYQLLRVDGGE-PVLLLDDVFAELDVMRRRALATAAESAEQVLVTAAVLEDIPAGWDARRVHIDVRADDTGSMSVVLP |
2O5V Chain:A ((13-330)) | ---------NYRNLAPGTLNFPEGVTGIYGENGAGKTNLLEAAYLALT-GQTDAPRIEQLIQAGETEAYVRADLQQGGSLSIQEVGLGRGR---RQLKVDGVRARTGDLPRGGAVWIRPEDSELVFGPPSGRRAYLDSLLSRLSARYGEQLSRYERTVSQRNAALRG----------GEEWAMHVWDDVLLKLGTEIMLFRRRALTRLDELAREA---------NAQLGSRKTLALTLTESTS-------PETYAADLRGRRAEELARGSTVTGPHRDDLLLTLGDFPASDYASRGEGRTVALALRRAELELLREKFGEDPVLLLDDFTAELDPHRRQYLLDLAASVPQAIVTGTEL----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142257 for 2486 contacts (-57.2/contact) +
2D Compatibility (PS) -35415 + (NN) -23023 + (LL) 4392
1D Compatibility (HY) -11600 + (ID) 5950
Total energy: -213853.0 ( -86.02 by residue)
QMean score : 0.474
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