Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQVETRLTPRERLTRGLAYSAVGPVDVTRGLLELGVGLGLQSARSTAAGLRRRYREGRLAREVAAAQETLAQELTAAQDVVANLPQALQDARTQRRSKHHLWIFAGIAAAILAGGAVAFSIVRRSSRPEPSPRPPSVEVQPRS
4BQL Chain:A ((42-124))
-----------------GTSYVKYGPITLNEPKMVQTRGLFL---RDLPESVKMRIPPDVLARGLVVGDEEVRKYLSSVRDVQRNLKYPLKDG-VARRDDEEAW-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4BQL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9949 for 463 contacts (-21.5/contact) +
2D Compatibility (PS) -8319 + (NN) 1006 + (LL) 4244
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -18568.0 ( -40.10 by residue)
QMean score : 0.265
(partial model without unconserved sides chains):
PDB file :
Tito_4BQL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BQL-query.scw
PDB file :
Tito_Scwrl_4BQL.pdb
: