Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTRLQAPVAVTPPLPTRRNAELLLLCFAAVITFAALLVVQANQDQGVPWDLTSYGLAFLTLFGSAHLAIRRFAPYTDPLLLPVVALLNGLGLVMIHRLDLVDNEIGEHRHPSANQQMLWTLVGVAAFALVVTFLKDHRQLARYGYICGLAGLVFLAVPALLPAALSEQNGAKIWIRLPGFSIQPAEFSKILLLIFFSAVLVAKRGLFTSAGKHL------LGMTLPRPRDLAPL-LAAWVISVGVMVFEKDLGA--SLLLYTSF--LVVVYLATQRFSWVVI-GLTLFAAGTLVAYFIFEHVRLRVQTWLDPFADPDGTGYQIVQSLFSFATGGIFGTGLGNGQPDTVPAASTDFIIAAFGEELGLVGLTAILMLYTIVIIRGLRTAIATRDSFGKLLAAGLSSTLAIQLFIVVGGVTRLIPLTGLTTPWMSYGGSSLLANYILLAILARISHGARRPLRTRPRNKSPITAAGTEVIERV |
| 4XMM Chain:B ((291-486)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIEQIFLYLLLNDVVRASKLAIESKNGHLSVLISYLGSNDPRIRDLAELQLQKW--STGGCSIDKNISKIYKLLSGSPFEGLFSLKELESEFSWLCLLNLTL-CYGQIDEYSLESLVQSHLDKFSLPYDDPIGVIFQL------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73980 for 781 contacts (-94.7/contact) +
2D Compatibility (PS) -12161 + (NN) 2226 + (LL) 26920
1D Compatibility (HY) -10000 + (ID) 2000
Total energy: -68995.0 ( -88.34 by residue)
QMean score : 0.150
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