Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQGLVLQLTRAGFLMLLWVFIWSVLRILKTDIYAPTGAVMMRRGLALRGTLLGARQRRHAARYLVVTEGALTGARITLSEQPVLIGRADDSTLVLTDDYASTRHARLSMRGSEWYVEDLGSTNGTYLDRAKVTTAVRVPIGTPVRIGKTAIELRP
2XT9 Chain:B ((14-97))
---------------------------------------------------------------LVVKRGPNAGSRFLLDQPTTSAGRHPDSDIFLDDVTVSRRHAEFRLEGGEFQVVDVGSLNGTYVNREPVDSAV-LANGDEVQIGK-------
General information:
TITO was launched using:
RESULT:
Template:
2XT9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45535 for 574 contacts (-79.3/contact) +
2D Compatibility (PS) -9113 + (NN) -2845 + (LL) 7132
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -57361.0 ( -99.93 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_2XT9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XT9-query.scw
PDB file :
Tito_Scwrl_2XT9.pdb
: