Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVTDEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLAWFGPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDY---AFI--VNNLTPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAED-------FCFLVTQRRALSTLDVNAVGEDAQRWLTIAQAFAGPPGRGR |
| 4M8K Chain:A ((42-160)) | ---------------------------------------------------------------------------------------------------------------------NLCWYGVPGEKKENDVTKVEETWWYRFIHEHGFQLERNNSYSGSTVCHTGYEKADYSDRSFITRIHNLGTPD---IILVFGGTNDSWAGAPIGAYQYDGWTKADLYSFRPAFCYLLASLKQL------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27367 for 609 contacts (-44.9/contact) +
2D Compatibility (PS) -10607 + (NN) -2018 + (LL) 9468
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -38324.0 ( -62.93 by residue)
QMean score : -0.103
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