Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSRN |
2GS5 Chain:A ((18-193)) | ---------------------GMVLVAAPSMESEDFARSVILIIEHSEYATFGVNLASRSDVAVFNVIPEWVPCVTKPQALYIGGPLNQQSVVGVGVTAQGVDAARVDNLTRLANRLVMVNLGADPEEIKPLVSGMRLFAGHAEWAPGQLAQEIENGDWFVAPALPSDVTAPGSVDVWGDVMRRQPMPLPLYSTFPV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GS5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32360 for 1280 contacts (-25.3/contact) +
2D Compatibility (PS) -16902 + (NN) 493 + (LL) 1824
1D Compatibility (HY) 8400 + (ID) 650
Total energy: -39195.0 ( -30.62 by residue)
QMean score : -0.010
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