Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLAGVLCMCAAAASALFGSWSLCHTPTADPTALALRAMAPTQLAAAVMLAAGGVVAVAAPGHTALMVVIVCIAGAVGTLAAGSWQSAQYALRRETASPTANCVGSCAVCTQACH
2ZXQ Chain:A ((239-312))
---------------------------TGDATSLGL-ASAPWYYHRTVTDSKGKKYTVA---ETALPQMAVAIAGDENEDGAVNWQDGAIAYRDIMNNP----------------
General information:
TITO was launched using:
RESULT:
Template:
2ZXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18868 for 280 contacts (-67.4/contact) +
2D Compatibility (PS) -7557 + (NN) -2592 + (LL) 3252
1D Compatibility (HY) -1200 + (ID) 1250
Total energy: -28215.0 ( -100.77 by residue)
QMean score : -0.095
(partial model without unconserved sides chains):
PDB file :
Tito_2ZXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZXQ-query.scw
PDB file :
Tito_Scwrl_2ZXQ.pdb
: