Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSFDVVFVGHRRGEVRSDNAMLGLLCDAAFDELTRPDVVIFPGGIGTRTLIHDQTVLDWVREAHRHTLLTTSVCTGGLVLAAAGLLNGLTATTHWRVQDLFNSLGARYVPQRVVEHLPERVITAAGVSSGIDMGLRLVELLVSREAAEASQLMIEYDPQPPVDAGSLAKASPATHRLALEFYQHRL
3NOV Chain:A ((31-194))
LPDVQVHLIWKEPGPVVASSGLV-LQATTSFADCPPLDVICIPGGTGVGALMEDPQALAFIRQQAARARYVTSVCTGSLVLGAAGLLQGKRATTHWAYHELLAPLGAIPVHERVVRD--GNLLTGGGITAGIDFALTLAAELFDAATAQRVQLQLEYAPAPPFNAGS--------------------
General information:
TITO was launched using:
RESULT:
Template:
3NOV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96704 for 1223 contacts (-79.1/contact) +
2D Compatibility (PS) -17660 + (NN) -5080 + (LL) 1828
1D Compatibility (HY) -15200 + (ID) 3150
Total energy: -135966.0 ( -111.17 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_3NOV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NOV-query.scw
PDB file :
Tito_Scwrl_3NOV.pdb
: