Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEIGPSLRYATAKVNKASRSGGFGSGSRPAPAQTSSASGDDPWGSAPASGSFGGGDDEPPF
1UE1 Chain:A ((3-120))
--GDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYD-----WKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEIGPSLRYATAKVNKA--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UE1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51929 for 710 contacts (-73.1/contact) +
2D Compatibility (PS) -12003 + (NN) -1730 + (LL) -840
1D Compatibility (HY) -13200 + (ID) 5600
Total energy: -85302.0 ( -120.14 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_1UE1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UE1-query.scw
PDB file :
Tito_Scwrl_1UE1.pdb
: