Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MCADAQPSGSVGLLGRNCPTATTRWRRAGEGLTAADTIEVKLWAGKPRLHPLVPKRAVGVLLAVAHGQVAKTPSATRAIAFRHVRLMRVRWICAGNRGRKHKRRCTTQYRSTQASKLQLHFKLRQTLNRLGGLQAMVSACG |
3V4B Chain:A ((98-140)) | ------------------------WRRGPVGMTALAAIDVALWDIKAKL-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1505 for 96 contacts (15.7/contact) +
2D Compatibility (PS) -2533 + (NN) -24 + (LL) 8188
1D Compatibility (HY) -2800 + (ID) 600
Total energy: 3736.0 ( 38.92 by residue)
QMean score : -0.160
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