Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPTDRRVRADAARNRARVLEVAYQTFAADGLSVPVDEIARRAGVGAGTVYRHFPTKEALFQAVIADRMHRIIDKGHALLKSKHPGDALFAFLRSMVLQWGATDRGLVEALAGVGIEISSAAPEAEADFLDLLTDLLRAAQRAGTVRPDVDVLEVKTLLVGCQAMQSYNAELAAKVTDVALDGLRANRK
2QWT Chain:A ((16-181))
------------------VLEVAYDTFAAEGLGVPMDEIARRAGVGAGTVYRHFPTKQALVVAVAEDRVRRIVDHARTLLAAEGPGEALFVFMRDMV-RSAAADYGLVDALVGYGLDLEVAAPGAEAAFLATLGELLAAAQRAGTVRADVDVAVIKALL------------VSERVVRVIEDGLR----
General information:
TITO was launched using:
RESULT:
Template:
2QWT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111527 for 1129 contacts (-98.8/contact) +
2D Compatibility (PS) -17124 + (NN) -15025 + (LL) 2704
1D Compatibility (HY) -17200 + (ID) 4850
Total energy: -163022.0 ( -144.40 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_2QWT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QWT-query.scw
PDB file :
Tito_Scwrl_2QWT.pdb
: