Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKWTAADIPDQTGRTAVITGANTGLGFETAAALAAHGAHVVLAVRNLDKGKQAAARITEATPGAEVELQELDLTSLASVRAAAAQLKSDHQRIDLLINNAGVMYTPRQTTADGFEMQFGTNHLGHFALTGLLIDRLLPVAGSRVVTISSVGHRIRAAIHFDDLQW-ERRYRRVAAYGQAKLANLLFTYELQRRLAPGGTTI-AVASHPGVSNTEVVRNMPRPLVAVAAILAPLMQDAELGALPTLRAATDPAVRGGQYFGPDGFGEIRGYPKVVASSAQSHDEQLQRRLWAVSEELTGVVYPVG |
3RD5 Chain:A ((4-291)) | -TGWTAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG-EAAAR----TMAGQVEVRELDLQDLSSVRRFADGVSG----ADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLT----DRVVTVSSMAH-WPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNL------------------ATDADFGARQTLYAASQD-LPGDSFVGPR-FGYL-GRTQPVGRSRRAKDAGMAAALWALSEQLTKTEFPL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124513 for 2409 contacts (-51.7/contact) +
2D Compatibility (PS) -29446 + (NN) -16842 + (LL) 2780
1D Compatibility (HY) -22000 + (ID) 7000
Total energy: -197021.0 ( -81.79 by residue)
QMean score : 0.515
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