Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKWTAADIPDQTGRTAVITGANTGLGFETAAALAAHGAHVVLAVRNLDKGKQAAARITEATPGAEVELQELDLTSLASVRAAAAQLKSDHQRIDLLINNAGVMYTPRQTTADGFEMQFGTNHLGHFALTGLLIDRLLPVAGSRVVTISSVGHRIRAAIHFDDLQW-ERRYRRVAAYGQAKLANLLFTYELQRRLAPGGTTI-AVASHPGVSNTEVVRNMPRPLVAVAAILAPLMQDAELGALPTLRAATDPAVRGGQYFGPDGFGEIRGYPKVVASSAQSHDEQLQRRLWAVSEELTGVVYPVG
3RD5 Chain:A ((4-291))-TGWTAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG-EAAAR----TMAGQVEVRELDLQDLSSVRRFADGVSG----ADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLT----DRVVTVSSMAH-WPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNL------------------ATDADFGARQTLYAASQD-LPGDSFVGPR-FGYL-GRTQPVGRSRRAKDAGMAAALWALSEQLTKTEFPL-


General information:
TITO was launched using:
RESULT:

Template: 3RD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124513 for 2409 contacts (-51.7/contact) +
2D Compatibility (PS) -29446 + (NN) -16842 + (LL) 2780
1D Compatibility (HY) -22000 + (ID) 7000
Total energy: -197021.0 ( -81.79 by residue)
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_3RD5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RD5-query.scw
PDB file : Tito_Scwrl_3RD5.pdb: