Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSITVSVDPVDPVDPVDPVDPVDAVVAAGSDGLTVARIESEIGALEFLNELRTELKSGQFRPQPVRERKIPKPGGLGKVRRLGIPTVADRVVQAALKLVLEPIFETDFEPVSYGFRPARRAHDTIAEIHLFGTQEYRWVLDADIKACFDRID-----HADLMDRVRHRIKDKRVLRLVN----WQRIRHRWNWTDVRRWLTDPTGRWHPISADGITLFNPAAVPIRRYRYRGNTIPTPWTQAV |
2GGO Chain:A ((161-224)) | ------------------------------------------------------------------------------------------------------------------------------------------YKLNSDIFTYLDKISISERGELELTDAINLMAKDHRV-KVIEYEGYWMDIGKPWNIIDVNKWALD----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11721 for 261 contacts (-44.9/contact) +
2D Compatibility (PS) -5692 + (NN) 310 + (LL) 10680
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -12573.0 ( -48.17 by residue)
QMean score : 0.144
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