Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPAVTTPSNHWGDERRKLSHQPPVRGQILGRRQARRLSQHFARVGVEAPPKRLQEMLLGAPAADEEWTDVKFALIVTQLNHEKRVAKFHRLQRRATHSLICLGLVLVALNFLICLAYIFFSLTQHAAAL
2Q2E Chain:B ((285-327))
---------------------PEIDPHALGRHEARKLIEAFEKVKIMAPP-------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2Q2E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2276 for 93 contacts (-24.5/contact) +
2D Compatibility (PS) -3187 + (NN) -2582 + (LL) 9304
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -1341.0 ( -14.42 by residue)
QMean score : -0.052
(partial model without unconserved sides chains):
PDB file :
Tito_2Q2E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q2E-query.scw
PDB file :
Tito_Scwrl_2Q2E.pdb
: