Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIKRRTQEERSAATREALITGARKLWGLRGYAEVGTPEIATEAGVTRGAMYHQFADKAALFRDVVEVVEQDVMARMATLVAASGAATPADAIRAAVDAWLEVSGDPEVRQLILLDAPVVLGWAGFRDVAQRYSLGMTEQLITEAIRAGQLARQPVRPLAQVLIGALDEAAMFIATADDPKRARRETRQVLRRLIDGMLNG
2HYT Chain:A ((5-173))
-----RTRAEMEE-TRATLLATARKVFSERGYADTSMDDLTAQASLTRGALYHHFGDKKGLLAAVVEQIDAEMDERLQAI--SDTAEDDWEGFRCRCRAYLEMALEPEIQRIVLRDARAVLG--GASPDSQRHCVESMQRLIDNLIRQGVVAEADPQALASLIYGSLAEAAFWIAEGED----------------------
General information:
TITO was launched using:
RESULT:
Template:
2HYT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92442 for 1185 contacts (-78.0/contact) +
2D Compatibility (PS) -18643 + (NN) -9771 + (LL) 3036
1D Compatibility (HY) -12400 + (ID) 3000
Total energy: -133220.0 ( -112.42 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_2HYT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HYT-query.scw
PDB file :
Tito_Scwrl_2HYT.pdb
: