Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPKRSRLVVCAPEPSHAREFPDVAVFSGGRANASQAERLARAVGRVLADRGVTGGARVRLTMANCADGPTLVQINLQVGDTPLRAQAATAGIDDLRPALIRLDRQIVRASAQWCPRPWPDRPRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGPSGLRLARQHHVFPPGWSRCRAPAGPPVPLIVNSRPTPVLTEAAAVDRAREHGLPFLFFTDQATGRGQLLYSRYDGNLGLITPTGDGVADGLA |
| 3LYV Chain:A ((27-55)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GHDFFIYTDSEDGATNILYRREDGNLGLI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10555 for 121 contacts (-87.2/contact) +
2D Compatibility (PS) -3191 + (NN) -2704 + (LL) 15048
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -5352.0 ( -44.23 by residue)
QMean score : 0.692
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