Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVTVGVICAIPQELAYLRGVLVDAKRQQVAQILFDSGQLDAHRVVLAAAGMGKVNTGLTATLLADRFGCRTIVFTGVAGGLDPELCIGDIVIADRVVQHDFGLLTDERLRPYQPGHIPFIEPTERLGYPVDPAVIDRVKHRLDGFTLAPLSTAAGGGGRQPRIYYGTILTGDQYLHCERTRNRLHHEL-GGMAVEMEGGAVAQICASFDIPWLVIRALSDLAGADSGVDFNRFVGEVAASSARVLLRLLPVLTAC
3BL6 Chain:A ((1-230))
-AMMIGIIGAMEEEVTILKNKLTQLSEISVAHVKFYTGILKDREVVITQSGIGKVNAAISTTLLINKFKPDVIINTGSAGALDESLNVGDVLISDDVKYHD----ADATAFGYEYGQIPQMP----VAFQSSKPLIEKVSQVVQQQQLTA--------------KVGLIVSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSSQTVEALVSQL---
General information:
TITO was launched using:
RESULT:
Template:
3BL6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -215616 for 2063 contacts (-104.5/contact) +
2D Compatibility (PS) -24443 + (NN) -7577 + (LL) 1072
1D Compatibility (HY) -19600 + (ID) 3850
Total energy: -270014.0 ( -130.88 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_3BL6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BL6-query.scw
PDB file :
Tito_Scwrl_3BL6.pdb
: