Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSREELVEVFDALDADLDRLDEVSFEVLSTP--ERLRSLERLECLARRLPAAQHTLINQLDTQASEEELGGTLCCALANRLRITKPEAGRRSAEAKP
1P8L Chain:A ((14-99))
-----------------------------------------------------LAATLENIEDVQFPCLATPKIDGIRSVKQTQMLSRTFKPIRNSVMNRLLTELLPEGSDGEISIEGA-------------------
General information:
TITO was launched using:
RESULT:
Template:
1P8L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1797 for 293 contacts (-6.1/contact) +
2D Compatibility (PS) -5924 + (NN) 4870 + (LL) 5444
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -3507.0 ( -11.97 by residue)
QMean score : 0.041
(partial model without unconserved sides chains):
PDB file :
Tito_1P8L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P8L-query.scw
PDB file :
Tito_Scwrl_1P8L.pdb
: