Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLKVKGEGLGAQVTGVD-PKNLDDITTDEIRDIVYTNKLVVLKDVHPSPREFIKLGRIIGQIVPYYEPMYHH-EDHPEIFVSSTEEGQGVPKTGAFWHIDYMFMPEPFAFSMVLPLAVPGHDRGTYFIDLARVWQSLPAAKRDPARGTVSTHD-----PRRHIKIRPSDVYRPIGEVWDEINRTTPPIKWPTVIRHPKTGQEILYICATGTTKIEDKDGNPVDPEVLQELMAATGQLDPEYQSPFIHTQHYQVGDIILWDNRVLMHRAKHGSAAGTLTTYRLTMLDGLKTPGYAA |
| 3PVJ Chain:A ((3-272)) | LTITPLSPALGAQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPEQQARFAARFGDL--HIHPIYPNVPDTPQVLVLDTAVTDV--RDNAVWHTDVTFLPTPALGAVLSAKQLPAYGGDTLWASGIAAFEALSAPLREMLDGLTATHDFTKSFPLERFGTTPQDLAR-----WEATRRNNPPLSHPVVRTHPVSGRKALFVNEGFTTRINEL--SELESDALLRLLFAHAT-RPEFSIRW----RWQENDVAFWDNRVTQHFAVDDYRPNRRVMHRATIL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122452 for 2079 contacts (-58.9/contact) +
2D Compatibility (PS) -28098 + (NN) -6434 + (LL) 752
1D Compatibility (HY) -9200 + (ID) 3500
Total energy: -168932.0 ( -81.26 by residue)
QMean score : 0.440
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