Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAPVVGDADLQSVRRIRLDVLGMSCAACASRVETKLNKIPGVR-ASVNFATRVATI--DAVGMAADELCGVVEKAGYHAAPHTETTVLDKRTK-DPDGAHARRLLRRLLVAA---VLFVPLADLSTLFAIVPSARVPGWGYILTALAAPVVTWAAWPFHSVALRNARHRTTSMETLISVGIVAATAWSLSSVFGDQPPREGSGIWRAILNSDSIYLEVAAGVTVFVLAGRYFEARAKSKAGSALRALAELGAKNVAVLLPDGAELVIPASELKKRQRFVTRPGETIAADGVVVDGSAAIDMSAMTGEAKPVRAYPAASVVGGTVVMDGRLVIEATAVGADTQFAAMVRLVEQAQTQKARAQRLADHIAGVFVPVVFVIAGLAGAAW-LVSGAGADRAFSVTLGVLVIACPCALGLATPTAMMVASGRGAQLGIFIKGYRALETIRSIDTVVFDKTGTLTVGQLAVS-TVTMAGSGTSERDREEVLGLAAAVESASEHAMAAAIVAASPDPGPVNG----FVAVAGCGVSGEVGGHHVEVGKPSWITR--TTPCHDAALVSARLDGESRGETVVFVSVDGVVRAALTIADTLKDSAAAAVAALRSRGLRTILLTGDNRAAADAVAAQVGIDSAVADMLPEGKVDVIQRLREEGHTVAMVGDGINDGPALVGADLGLAIGRGTDVALGAADIILVRDDLNTVPQALDLARATMRTIRMNMIWAFGYNVAAIPIAAAGLLNPL--------IAGAAMAFSSFFVVSNSLRLRNFGAQ |
| 3J09 Chain:A ((22-728)) | --------------------VTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYG--------VVDEQAAVSAEVEHLSRMKRKLYVAAFAGVLLLFLAHFISL---------PYEDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAG-VLPREYS------------FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKT-AVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------DERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVAD----GILVGNKRLMEDFGVAVSNEVELALEKLEREAK--TAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIP-AAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNY--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J09.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -410223 for 5930 contacts (-69.2/contact) +
2D Compatibility (PS) -73395 + (NN) -21163 + (LL) 3912
1D Compatibility (HY) -57200 + (ID) 14250
Total energy: -572319.0 ( -96.51 by residue)
QMean score : 0.367
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