Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVGPVGHQCAECVREGARAVRQPRTPFGGRQRSATPVVTYTLISLNALVFVMQVTVMGLERQLA--LWPPAVA--SGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAV-SALGGSVLVYLIAPLNTATAGASGAVFGLFGATFMVARRLH--LDV-RWVVALIVINLAFTFLAPAISWQ----GHVGGLVTGALVAATYVYAPRERRNLIQATVTITVLVAFVVLIGWRTVDLLALFGGRLNLS
2NR9 Chain:A ((11-176))
--------------------------------------ITLILTALCVLIYIAQQ--LGFEDDIMYLMHYPAYEEQDSEVWRYISHTLVHLSNLHILFNLSWFFIFGGMIERTFGSVKLLMLYVVASAITGYVQNYVSGP---AFFGLSGVVYAVLGYVFIRDKLNHHLFDLPEGFFTMLLVGIALGFISPLFGVEMGNAAHISGLIVG----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2NR9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120973 for 1146 contacts (-105.6/contact) +
2D Compatibility (PS) -15533 + (NN) -3365 + (LL) 7756
1D Compatibility (HY) -19600 + (ID) 2100
Total energy: -153815.0 ( -134.22 by residue)
QMean score : 0.258
(partial model without unconserved sides chains):
PDB file :
Tito_2NR9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NR9-query.scw
PDB file :
Tito_Scwrl_2NR9.pdb
: