Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVWITGAGGMMGSHLAEMLLAAGHDVYATYCRPTIDPSDLQFNGAEVDITDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAKIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVARIFNCTGP-RKVGDALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALMLMLDKGEAGADYNVGGSIAYEMGDVLKQVIAACKRDDIVPEVDPALLRPTDEKIIYGDCSKLAAITGWQQEICLTQTIADMFDYWRSKSESALMV
2PK3 Chain:A ((13-319))MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEM--ISLDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANV-KIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYR---------


General information:
TITO was launched using:
RESULT:

Template: 2PK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -207775 for 2673 contacts (-77.7/contact) +
2D Compatibility (PS) -33005 + (NN) -15878 + (LL) 476
1D Compatibility (HY) -17600 + (ID) 5450
Total energy: -279232.0 ( -104.46 by residue)
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_2PK3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PK3-query.scw
PDB file : Tito_Scwrl_2PK3.pdb: